BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035D01LP1|AL430034
(877 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1698 1720 0.0
>3x_Contig1698
Length = 21001
Score = 1720 bits (865), Expect = 0.0
Identities = 872/877 (99%)
Strand = Plus / Plus
Query: 1 gatcttgagtacttctccaaaaatactcgttcgtgtagaatgggaaagtaaggatgaatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18830 gatcttgagtacttctccaaaaatactcgttcgtgtagaatgggaaagtaaggatgaatc 18889
Query: 61 agtttaaagaaaatttcaaccaatattttaccatgaggatgcactagtttttccactaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18890 agtttaaagaaaatttcaaccaatattttaccatgaggatgcactagtttttccactaaa 18949
Query: 121 tctatatcacgttcttgcttcaagtaaagttcttgattaaaatcgtctcttaagatgaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18950 tctatatcacgttcttgcttcaagtaaagttcttgattaaaatcgtctcttaagatgaac 19009
Query: 181 tgtgcattgggagataccttgcgtagtgcgacattttttgataattgcacttgctcaatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19010 tgtgcattgggagataccttgcgtagtgcgacattttttgataattgcacttgctcaatc 19069
Query: 241 ttgtctagtttcatgtgattgattagattaatatcgaagatggatgtcgggcccacaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19070 ttgtctagtttcatgtgattgattagattaatatcgaagatggatgtcgggcccacaaaa 19129
Query: 301 taggaagacctgggatattgaatggaagactgagcataattaatttgacgttgtatgctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19130 taggaagacctgggatattgaatggaagactgagcataattaatttgacgttgtatgctc 19189
Query: 361 tgttgaccagaagttagcggttgctgctgttgtggttgacctgagttcattccgtaattg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19190 tgttgaccagaagttagcggttgctgctgttgtggttgacctgagttcattccgtaattg 19249
Query: 421 aactgattgaaagcataaagtgacgagggggatgccttttgtgctgcaccgttgttgaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19250 aactgattgaaagcataaagtgacgagggggatgccttttgtgctgcaccgttgttgaac 19309
Query: 481 tctgacgcattcctttgatagggatatggaggttgttcataacttgtctgagatttgtac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19310 tctgacgcattcctttgatagggatatggaggttgttcataacttgtctgagatttgtac 19369
Query: 541 caattctgaattgcgtcattgtagtattgtatcggcagattgttagcgctatcactggta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19370 caattctgaattgcgtcattgtagtattgtatcggcagattgttagcgctatcactggta 19429
Query: 601 agctcattattaggcgtgttactgttgctattattaccaccggcgttgttaatattattg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19430 agctcattattaggcgtgttactgttgctattattaccaccggcgttgttaatattattg 19489
Query: 661 ttgatattattgttattattattactattagggttactgttattaatatttgtgttactg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19490 ttgatattattgttattattattactattagggttactgttattaatatttgtgttactg 19549
Query: 721 tttttattttgattattattgctaaacttagtacgtttcaacaattcatgcacatttatg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19550 tttttattttgattattattgctaaacttagtacgtttcaacaattcatgcacatttatg 19609
Query: 781 ttctcatccmcyctatcmcgtttgttcatctgtttttgtagcacatcccccgccactttc 840
||||||||| | ||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 19610 ttctcatccactctatcacgtttgttcatctgtttttgtagcacatccgccgccactttc 19669
Query: 841 ccacycggtaactccgagaatgtacacttgatcccct 877
|||| ||||||||||||||||||||||||||||||||
Sbjct: 19670 ccactcggtaactccgagaatgtacacttgatcccct 19706
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7239
Number of Sequences: 1807
Number of extensions: 7239
Number of successful extensions: 231
Number of sequences better than 1.0e-20: 1
length of query: 877
length of database: 10,358,551
effective HSP length: 16
effective length of query: 861
effective length of database: 10,329,639
effective search space: 8893819179
effective search space used: 8893819179
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)